Difference between revisions of "Introduction to Microarray analysis"
From Organic Design wiki
m |
m (better...) |
||
| Line 2: | Line 2: | ||
[[Image:expt2.tiff|500px]] | [[Image:expt2.tiff|500px]] | ||
---- | ---- | ||
| − | + | [[Image:overview2.tiff|thumb|Analysis workflow from scanner to results]] | |
====Scratch pad==== | ====Scratch pad==== | ||
Revision as of 01:42, 14 March 2006
Overview of process
Scratch pad
- A flow diagram for analysis
- Recap of cDNA microarrays (slide 3)
- Microarray data issues (slide 4)
- Microarray data issues (continued)
- Large amount of data (GPR/JPEG file size)
- Subjective
- Need a log of what was done so someone else can quickly reroduce the results
- → Reproducible research (someone else can understand/reproduce the results) (McGintys talk)
- Analysis process
- R resources/contributed guides (including downloading)
- R tutorial of basics (objects/indexing/functions)
